Gene mapping, discovery, and expression

methods and protocols

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March 28, 2025 | History

Gene mapping, discovery, and expression

methods and protocols

A collection of cutting-edge computational tools and experimental techniques to study how genes are regulated, and to reconstruct the regulatory networks through which various cell-types are produced. On the computational side, web-based technologies to localize genes, to access and retrieve data from microarray databases, to conduct comparative genomics, and to discover the potential genomic DNA that may control the expression of protein-coding genes. Detailed experimental techniques described include methods for studying chromatin structure and allele-specific gene expression, methods for high-throughput analysis to characterize the transcription factor binding elements, and methods for isolating and identifying proteins that interact with DNA.

Publish Date
Publisher
Humana Press
Language
English
Pages
334

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Edition Availability
Cover of: Gene Mapping, Discovery, and Expression
Gene Mapping, Discovery, and Expression: Methods and Protocols
2010, Humana Press
in English
Cover of: Gene mapping, discovery, and expression
Gene mapping, discovery, and expression: methods and protocols
2006, Humana Press
in English
Cover of: Gene Mapping, Discovery, and Expression
Gene Mapping, Discovery, and Expression: Methods and Protocols
Jan 13, 2006, Humana Press
hardcover

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Book Details


Table of Contents

Use of genome browsers to locate your favorite genes / Minou Bina
Methods for identifying and mapping recent segmental and gene duplications in eukaryotic genomes / Razi Khaja ... [et al.]
Identification and mapping of paralogous genes on a known genomic DNA sequence / Minou Bina
Quantitative DNA fiber mapping in genome research and construction of physical maps / Heinz-Ulrich G. Weier and Lisa W. Chu
Prins for mapping single copy genes / Avirachan T. Tharapel and Stephen S. Wachtel
Vista family of computational tools for comparative analysis of DNA sequences and whole genomes / Inna Dubchak and Dmitriy V. Ryaboy
Computational prediction of CIS-regulatory modules from multispecies alignments using Galaxy, table browser, and GALA / Laura Elnitski, David King, and Ross C. Hardison
Comparative promoter analysis in vertebrate genomes with the CORG workbench / Christoph Dieterich and Martin Vingron
CIS-regulatory region analysis using BEARR / Vinsensius Berlian Vega
A database of 9-mers from promoter region of human protein-coding genes / Minou Bina, Phillip Wyss, and Syed Rehan Shah
A program toolkit for the analysis of regulatory regions of genes / Phillip Wyss, Sheryl A. Lazarus, and Minou Bina
Analysis of allele-specific gene expression / Julian Charles Knight
Construction of microrna expression vector in mammalian cells / Yoko Fukuda, Hiroaki Kawasaki, and Kazunari Taira
Mining microarray data at NCBI's gene expression omnibus (GEO) / Tanya Barrett and Ron Edgar
The Stanford microarray database: a user's guide / Jeremy Gollub, Catherine A. Ball, and Gavin Sherlock
Detecting nucleosome ladders on unique DNA sequences in mouse liver nuclei / Tomara J. Fleury, Alfred Cioffi, and Arnold Stein
DNA methyltransferase probing of DNA/protein interactions / Scott A. Hoose and Michael P. Kladde
Protein binding microarrays (PBMS) for the rapid, high-throughput characterization of the sequence specificities of DNA binding proteins / Michael F. Berger and Martha L. Bulyk
Quantitative profiling of protein-DNA binding on microarrays / Jiannis Ragoussis, Simon Field, and Irina A. Udalova
Analysis of protein-DNA binding by streptavidin-agarose pulldown / Kenneth K. Wu
Isolation and mass spectrometry of specific DNA-binding proteins / Mariana Yaneva and Paul Tempst
Isolation of transcription factor complexes by in vivo biotinylation tagging and direct binding to streptavidin beads / Patrick Rodriguez ... [et al.].

Edition Notes

Includes bibliographical references and index.

Published in
Totowa, N.J
Series
Methods in molecular biology ;, v. 338
Genre
Laboratory Manuals.

Classifications

Dewey Decimal Class
572.8/633
Library of Congress
QH445.2 .G436 2006, QH345QD415-436QH573-

The Physical Object

Pagination
p. ;
Number of pages
334

Edition Identifiers

Open Library
OL3409486M
ISBN 10
1588295753
LCCN
2005025438
OCLC/WorldCat
61404526
Goodreads
2663295

Work Identifiers

Work ID
OL16935599W

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March 28, 2025 Edited by ImportBot Redacting ocaids
February 12, 2025 Edited by MARC Bot import existing book
December 29, 2022 Edited by MARC Bot import existing book
October 31, 2022 Edited by ImportBot import existing book
April 1, 2008 Created by an anonymous user Imported from Scriblio MARC record