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This edition provides tools and databases used in bioinformatics, loosely defined as the intersection of molecular and computational biology. With the goal of helping the reader design and implement a successful sequence analysis strategy, topics covered include: using software and Internet resources, submitting DNA sequences to databases, information retrieval from databases, phylogenetic analysis, a database for genome information called ACeDB, and practical aspects of multiple sequence alignment.
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Bioinformatics: a practical guide to the analysis of genes and proteins
2005, Wiley, John Wiley
in English
- 3rd ed.
0471478784 9780471478782
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Book Details
Table of Contents
Sequence databases /Rolf Apweiler
Mapping databases / Peter S. White and Tara C. Matise
Information retrieval from biological databases / Andreas D. Baxevanis
Genomic databases / Tyra G. Wolfsberg
Predictive methods using DNA sequences / Enrique Blanco and Roderic Guigó
Predictive methods using RNA sequences / David Mathews and Michael Zuker
Sequence polymorphisms / James C. Mullikin and Stephen T. Sherry
Predictive methods using protein sequences / Yanay Ofran ane Burkhard Rost
Protein structure prediction and analysis / David Wishart
Intermolecular interactions and biological pathways / Gary D. Bader and Anton J. Enright
Assessing pairwise sequence similarity : BLAST and FASTA / Andreas D. Baxevanis
Creation and analysis of protein multiple sequence alignments / Geoffrey J. Barton
Sequence assembly and finishing methods / Nancy F. Hansen, Pamela Jacques Thomas and Gerard G. Bouffard
Phylogenetic analysis / Fiona S.L. Brinkman
Computational approaches in comparative genomics / Andreas D. Baxevanis
Using DNA micorarrays to assay gene expression / John Quackenbush
Proteomics and protein identification / Mark R. Holmes, Kevin Ramkissoon and Morgan C. Giddings
Using Perl to facilitate biological analysis / Lincoln D. Stein.
Edition Notes
Includes bibliographical references and index.
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History
- Created September 20, 2008
- 10 revisions
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